STRINGSTRING
ecfA1 protein (Bifidobacterium adolescentis) - STRING interaction network
"ecfA1" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfA1annotation not available (269 aa)    
Predicted Functional Partners:
BADO_0261
annotation not available (197 aa)
 
   
  0.888
BADO_0668
annotation not available (257 aa)
   
          0.707
BADO_1465
annotation not available (90 aa)
   
          0.617
BADO_0741
annotation not available (271 aa)
   
          0.581
BADO_1435
annotation not available (485 aa)
   
          0.567
BADO_1543
annotation not available (139 aa)
   
          0.564
BADO_0203
annotation not available (226 aa)
 
          0.558
BADO_0096
annotation not available (138 aa)
   
          0.553
lolD_1
annotation not available (213 aa)
   
          0.548
BADO_0092
annotation not available (184 aa)
   
          0.531
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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