STRINGSTRING
BADO_1058 protein (Bifidobacterium adolescentis) - STRING interaction network
"BADO_1058" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BADO_1058annotation not available (411 aa)    
Predicted Functional Partners:
BADO_0007
annotation not available (178 aa)
   
          0.726
gyrA2
annotation not available (891 aa)
 
          0.688
BADO_0171
annotation not available (382 aa)
 
        0.575
BADO_0698
annotation not available (495 aa)
   
          0.541
BADO_1002
annotation not available (241 aa)
   
          0.533
BADO_1316
annotation not available (74 aa)
   
          0.524
BADO_0235
annotation not available (105 aa)
   
          0.511
BADO_0135
annotation not available (258 aa)
   
          0.509
BADO_0295
annotation not available (1206 aa)
 
        0.505
secE
Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation (75 aa)
   
          0.500
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
Server load: low (12%) [HD]