STRINGSTRING
dppC protein (Bifidobacterium adolescentis) - STRING interaction network
"dppC" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppCannotation not available (322 aa)    
Predicted Functional Partners:
dppB_2
annotation not available (308 aa)
  0.996
BADO_1112
annotation not available (553 aa)
  0.978
dppD_2
annotation not available (669 aa)
 
  0.976
BADO_1324
annotation not available (549 aa)
  0.965
BADO_0497
annotation not available (326 aa)
 
  0.880
BADO_0499
annotation not available (276 aa)
 
  0.763
BADO_0496
annotation not available (551 aa)
   
  0.717
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (948 aa)
         
  0.686
dppB_1
annotation not available (357 aa)
 
  0.668
BADO_0500
annotation not available (260 aa)
 
  0.662
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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