STRINGSTRING
ldh protein (Bifidobacterium adolescentis) - STRING interaction network
"ldh" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhannotation not available (320 aa)    
Predicted Functional Partners:
BADO_0204
annotation not available (396 aa)
   
 
  0.976
pyk
annotation not available (480 aa)
   
  0.973
pflB
annotation not available (791 aa)
   
 
  0.953
tkt
annotation not available (702 aa)
     
  0.935
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone (523 aa)
     
  0.929
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily (367 aa)
   
  0.928
pgi
annotation not available (565 aa)
   
 
  0.925
BADO_0053
annotation not available (367 aa)
     
 
  0.906
BADO_0732
annotation not available (825 aa)
   
 
  0.904
BADO_0476
annotation not available (431 aa)
   
 
  0.888
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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