STRINGSTRING
pppA protein (Bifidobacterium adolescentis) - STRING interaction network
"pppA" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pppAannotation not available (274 aa)    
Predicted Functional Partners:
BADO_1202
annotation not available (425 aa)
 
   
  0.977
BADO_1199
annotation not available (349 aa)
 
   
  0.957
BADO_1203
annotation not available (142 aa)
 
   
  0.935
BADO_1206
annotation not available (585 aa)
 
 
  0.929
BADO_1207
annotation not available (600 aa)
 
   
  0.928
BADO_1198
annotation not available (324 aa)
   
   
  0.876
BADO_1201
annotation not available (805 aa)
              0.845
BADO_1197
annotation not available (203 aa)
 
          0.823
BADO_0918
annotation not available (253 aa)
           
  0.538
BADO_1205
annotation not available (259 aa)
 
     
  0.512
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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