STRINGSTRING
BADO_1307 protein (Bifidobacterium adolescentis) - STRING interaction network
"BADO_1307" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BADO_1307annotation not available (541 aa)    
Predicted Functional Partners:
BADO_0868
annotation not available (105 aa)
   
          0.743
uppS
Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (263 aa)
         
  0.738
BADO_1184
annotation not available (256 aa)
   
          0.738
BADO_0991
annotation not available (241 aa)
   
          0.731
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (246 aa)
              0.727
pup
Prokaryotic ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation; Belongs to the prokaryotic ubiquitin-like protein family (63 aa)
   
          0.726
BADO_1009
annotation not available (1106 aa)
 
 
  0.705
BADO_1438
annotation not available (122 aa)
   
          0.704
tmp1
annotation not available (242 aa)
   
          0.699
BADO_0704
annotation not available (1034 aa)
 
          0.672
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
Server load: low (19%) [HD]