STRINGSTRING
lacR protein (Bifidobacterium adolescentis) - STRING interaction network
"lacR" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacRannotation not available (273 aa)    
Predicted Functional Partners:
BADO_1394
annotation not available (416 aa)
              0.888
BADO_1395
annotation not available (416 aa)
         
  0.826
BADO_0264
annotation not available (3112 aa)
         
  0.700
BADO_0326
annotation not available (909 aa)
         
  0.696
ptsG
annotation not available (697 aa)
 
   
  0.642
BADO_1392
Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily (382 aa)
 
          0.607
glpF
annotation not available (243 aa)
 
   
  0.448
ccpA_7
annotation not available (342 aa)
   
 
 
  0.407
BADO_0172
annotation not available (351 aa)
   
 
 
  0.407
BADO_1441
annotation not available (337 aa)
   
 
 
  0.404
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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