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araA protein (Bifidobacterium adolescentis) - STRING interaction network
"araA" - L-arabinose isomerase in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose (504 aa)    
Predicted Functional Partners:
ulaF
annotation not available (230 aa)
 
 
  0.994
BADO_0433
annotation not available (543 aa)
       
  0.839
BADO_1619
annotation not available (540 aa)
 
     
  0.822
galM
annotation not available (316 aa)
         
  0.696
xylA
annotation not available (449 aa)
           
  0.663
ptsG
annotation not available (697 aa)
           
  0.566
lacI
annotation not available (372 aa)
         
  0.559
BADO_0326
annotation not available (909 aa)
           
  0.547
BADO_1395
annotation not available (416 aa)
         
  0.527
xylB
annotation not available (506 aa)
         
  0.419
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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