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BADO_1669 protein (Bifidobacterium adolescentis) - STRING interaction network
"BADO_1669" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BADO_1669annotation not available (1055 aa)    
Predicted Functional Partners:
nudG
annotation not available (158 aa)
        0.974
BADO_1502
annotation not available (515 aa)
   
   
  0.713
BADO_0964
annotation not available (505 aa)
   
   
  0.713
BADO_1667
annotation not available (671 aa)
   
   
  0.695
BADO_1468
annotation not available (369 aa)
         
  0.685
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (948 aa)
   
 
  0.606
valS
Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a "posttransfer" editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner (909 aa)
   
      0.528
BADO_1665
Very short patch repair endonuclease; May nick specific sequences that contain T-G mispairs resulting from m5C-deamination (177 aa)
              0.526
BADO_1033
annotation not available (753 aa)
 
 
  0.500
BADO_1418
annotation not available (1358 aa)
 
   
  0.472
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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