STRINGSTRING
pknE protein (Bifidobacterium adolescentis) - STRING interaction network
"pknE" - annotation not available in Bifidobacterium adolescentis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknEannotation not available (327 aa)    
Predicted Functional Partners:
BADO_0259
annotation not available (728 aa)
   
          0.752
BADO_1726
annotation not available (675 aa)
         
  0.742
BADO_1119
annotation not available (186 aa)
   
          0.710
BADO_0266
annotation not available (225 aa)
   
          0.708
BADO_0859
annotation not available (462 aa)
   
        0.705
BADO_0824
annotation not available (502 aa)
   
          0.703
BADO_0705
annotation not available (509 aa)
   
          0.700
BADO_1378
annotation not available (134 aa)
   
 
  0.694
BADO_0418
annotation not available (191 aa)
   
          0.693
BADO_1734
annotation not available (706 aa)
   
          0.688
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 1680
Other names: AS 1.2190, ATCC 15703, B. adolescentis, BCRC 14606, Bifidobacterium adolescentis, CCRC 14606, CCUG 17359, CCUG 18363, CIP 64.59, DSM 20083, LMG 10502, NCAIM B.01822, NCTC 11814
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