STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001273905_01821Unannotated protein. (283 aa)    
Predicted Functional Partners:
GCA_001273905_01820
Unannotated protein.
 
 
 0.998
GCA_001273905_01819
Unannotated protein.
 
   
0.932
GCA_001273905_04589
Unannotated protein.
  
  
 0.803
GCA_001273905_01818
Unannotated protein.
  
  
 0.799
GCA_001273905_01823
Unannotated protein.
  
 
 0.763
GCA_001273905_01822
Unannotated protein.
  
    0.744
GCA_001273905_06284
Unannotated protein.
 
  
 0.710
GCA_001273905_04263
Unannotated protein.
  
 
 0.660
GCA_001273905_04262
Unannotated protein.
 
  
 0.637
GCA_001273905_04271
Unannotated protein.
   
  
 0.532
Your Current Organism:
Paenibacillus sp. FJAT27812
NCBI taxonomy Id: 1684143
Other names: P. sp. FJAT-27812, Paenibacillus sp. FJAT-27812
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.