STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316UJX8Uncharacterized protein. (1612 aa)    
Predicted Functional Partners:
A0A316U5L3
Synaptobrevin.
    
 0.639
A0A316UE20
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.618
A0A316U7M9
Vacuolar protein sorting-associated protein 35.
   
 
 0.615
A0A316U2X9
ANTH-domain-containing protein.
    
 0.598
A0A316U7V9
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 0.586
A0A316U3E5
ARF/SAR superfamily; Belongs to the small GTPase superfamily. Arf family.
    
 0.561
A0A316TY86
Glyco_trans_2-like domain-containing protein.
    
 0.547
A0A316U5Y3
Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.547
A0A316U8V5
Putative DNM1-dynamin-related GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.547
A0A316UA38
Glyco_trans_2-like domain-containing protein.
    
 0.547
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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