STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403595_03234Unannotated protein. (673 aa)    
Predicted Functional Partners:
GCA_001403595_03239
Unannotated protein.
 
 
0.695
GCA_001403595_02696
Unannotated protein.
  
     0.594
GCA_001403595_03232
Unannotated protein.
   
   0.588
GCA_001403595_01807
Unannotated protein.
  
 0.561
GCA_001403595_03233
Unannotated protein.
       0.554
GCA_001403595_02169
Unannotated protein.
  
  0.548
GCA_001403595_03231
Unannotated protein.
       0.505
GCA_001403595_02684
Unannotated protein.
  
  0.483
GCA_001403595_02147
Unannotated protein.
  
  0.466
GCA_001403595_03235
Unannotated protein.
      
0.463
Your Current Organism:
Gabonia massiliensis
NCBI taxonomy Id: 1686296
Other names: DSM 100571, G. massiliensis, Porphyromonadaceae bacterium GM3, strain GM3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.