STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001457815_01198Unannotated protein. (118 aa)    
Predicted Functional Partners:
GCA_001457815_03495
Unannotated protein.
  
 0.860
GCA_001457815_01735
Unannotated protein.
   
 0.677
GCA_001457815_02317
Unannotated protein.
 
 0.566
GCA_001457815_01196
Unannotated protein.
 
     0.559
GCA_001457815_01197
Unannotated protein.
       0.547
GCA_001457815_00710
Unannotated protein.
  
 0.535
GCA_001457815_03582
Unannotated protein.
  
 0.535
GCA_001457815_02272
Unannotated protein.
  
 0.502
GCA_001457815_01195
Unannotated protein.
       0.492
GCA_001457815_01199
Unannotated protein.
       0.412
Your Current Organism:
Vitreoscilla massiliensis
NCBI taxonomy Id: 1689272
Other names: CSUR P2036, Vitreoscilla sp. SN6, strain SN6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.