STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001407835_01651Unannotated protein. (238 aa)    
Predicted Functional Partners:
GCA_001407835_01653
Unannotated protein.
       0.801
GCA_001407835_01656
Unannotated protein.
       0.800
GCA_001407835_01654
Unannotated protein.
       0.798
GCA_001407835_01657
Unannotated protein.
       0.796
GCA_001407835_01652
Unannotated protein.
       0.789
GCA_001407835_01650
Unannotated protein.
       0.773
GCA_001407835_01655
Unannotated protein.
       0.773
GCA_001407835_01658
Unannotated protein.
       0.457
GCA_001407835_01659
Unannotated protein.
       0.457
GCA_001407835_01660
Unannotated protein.
       0.457
Your Current Organism:
Lagierella massiliensis
NCBI taxonomy Id: 1689303
Other names: CSUR P2012, L. massiliensis, Peptoniphilaceae bacterium SIT14, strain SIT14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.