STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS28632.1Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (548 aa)    
Predicted Functional Partners:
AMS30776.1
Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.906
AMS28499.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.807
AMS28877.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.726
AMS29181.1
Cytochrome Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.726
AMS28649.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.697
AMS28633.1
enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.640
AMS30382.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.622
AMS29606.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.603
AMS29695.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.587
AMS30379.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.587
Your Current Organism:
Hyphomonadaceae bacterium UKL131
NCBI taxonomy Id: 1690484
Other names: Alphaproteobacteria bacterium UKL13-1, H. bacterium UKL13-1, Hyphomonadaceae bacterium UKL13-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.