STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAN16273.1Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)    
Predicted Functional Partners:
OAN14885.1
Cysteine desulfurase NifS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.912
OAN14886.1
tRNA 2-thiouridine(34) synthase MnmA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.742
OAN14887.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.721
OAN14866.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.686
OAN14647.1
Iron-sulfur cluster assembly scaffold protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.685
OAN14884.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.611
OAN15578.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.500
OAN15973.1
Hpt protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.484
Your Current Organism:
Exiguobacterium undae
NCBI taxonomy Id: 169177
Other names: CCUG 47136, CIP 107162, DSM 14481, E. undae, Exiguobacterium sp. 190-11, Exiguobacterium undae Fruhling et al. 2002, strain L2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.