STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo0282Lmo0282 protein. (259 aa)    
Predicted Functional Partners:
lmo0286
Lmo0286 protein; Similar to aminotransferase.
 
 0.945
lmo0038
Putative agmatine deiminase 1.
 
 
 0.937
lmo0560
Similar to NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.928
lmo1734
Lmo1734 protein; Similar to glutamate synthase (large subunit).
    
 0.919
lmo1733
Lmo1733 protein; Similar to glutamate synthase (small subunit).
  
 0.909
aspB
Aminotransferase; Similar to aspartate aminotransferases.
 
 
 0.907
lmo0040
Putative agmatine deiminase 2.
 
 
 0.905
nifJ
NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase.
  
 
 0.904
citC
Isocitrate dehydrogenase [NADP]; Highly similar to isocitrate dehyrogenases.
  
 
  0.896
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
    
 0.896
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.