STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo0519Lincomycin resistance protein LmrB; Proton-dependent transporter. May mediate the efflux of lincomycin (By similarity); Belongs to the major facilitator superfamily. EmrB family. (471 aa)    
Predicted Functional Partners:
lmo0520
Lmo0520 protein; Similar to transcription regulator.
  
  
 0.703
lmo1409
Lmo1409 protein; Similar to multidrug-efflux transporter.
  
     0.586
lmo1860
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
  
 0.544
lmo1702
Fosfomycin resistance protein FosX; Catalyzes the hydration of fosfomycin. Belongs to the fosfomycin resistance protein family.
   
 
 0.531
lmo0518
Lmo0518 protein.
  
    0.529
lmo2818
Lmo2818 protein; Similar to transmembrane efflux protein.
  
 
0.471
lmo2750
Lmo2750 protein; Similar to para-aminobenzoate synthase component I.
   
 
 0.445
lmo1734
Lmo1734 protein; Similar to glutamate synthase (large subunit).
      
 0.418
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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