STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1107Lmo1107 protein; Highly similar to TN916 ORF17. (131 aa)    
Predicted Functional Partners:
lmo1104
Lmo1104 protein; Highly similar to TN916 ORF14 and to L. monocytogenes P60 protein.
 
    0.963
lmo1106
Lmo1106 protein; Highly similar to TN916 ORF16.
 
    0.963
lmo1105
Lmo1105 protein; Highly similar to TN916 ORF15.
 
    0.955
lmo1103
Lmo1103 protein; Highly similar to TN916 ORF13.
 
    0.953
lmo1109
Lmo1109 protein; Highly similar to TN916 ORF19.
 
    0.922
lmo1111
Lmo1111 protein; Highly similar to TN916 ORF20.
 
    0.913
lmo1108
Lmo1108 protein; Highly similar to TN916 ORF18.
 
  
 0.911
lmo1114
Lmo1114 protein; Highly similar to TN916 ORF23.
 
    0.902
lmo1110
Similar to unknown proteins.
  
    0.889
lmo1112
Lmo1112 protein; Highly similar to TN916 ORF21.
 
    0.875
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.