Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
lmo0167 | lmo1703 | gene:17592803 | gene:17594384 | Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.497 |
lmo0271 | lmo1703 | gene:17592922 | gene:17594384 | Lmo0271 protein; Highly similar to phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.491 |
lmo0271 | lmo1750 | gene:17592922 | gene:17594432 | Lmo0271 protein; Highly similar to phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | Lmo1750 protein. | 0.587 |
lmo0581 | lmo1703 | gene:17593232 | gene:17594384 | Lmo0581 protein. | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.543 |
lmo0811 | lmo1703 | gene:17593462 | gene:17594384 | Lmo0811 protein; Similar to carbonic anhydrase. | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.582 |
lmo0811 | lmo1938 | gene:17593462 | gene:17594623 | Lmo0811 protein; Similar to carbonic anhydrase. | Lmo1938 protein; Similar to similar to ribosomal protein S1 like protein. | 0.491 |
lmo1701 | lmo1702 | gene:17594382 | gene:17594383 | Lmo1701 protein. | Fosfomycin resistance protein FosX; Catalyzes the hydration of fosfomycin. Belongs to the fosfomycin resistance protein family. | 0.694 |
lmo1701 | lmo1703 | gene:17594382 | gene:17594384 | Lmo1701 protein. | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.709 |
lmo1701 | lmo1704 | gene:17594382 | gene:17594385 | Lmo1701 protein. | Lmo1704 protein; Similar to conserved hypothetical proteins. | 0.510 |
lmo1702 | lmo1701 | gene:17594383 | gene:17594382 | Fosfomycin resistance protein FosX; Catalyzes the hydration of fosfomycin. Belongs to the fosfomycin resistance protein family. | Lmo1701 protein. | 0.694 |
lmo1702 | lmo1703 | gene:17594383 | gene:17594384 | Fosfomycin resistance protein FosX; Catalyzes the hydration of fosfomycin. Belongs to the fosfomycin resistance protein family. | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.898 |
lmo1702 | lmo1704 | gene:17594383 | gene:17594385 | Fosfomycin resistance protein FosX; Catalyzes the hydration of fosfomycin. Belongs to the fosfomycin resistance protein family. | Lmo1704 protein; Similar to conserved hypothetical proteins. | 0.703 |
lmo1703 | lmo0167 | gene:17594384 | gene:17592803 | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.497 |
lmo1703 | lmo0271 | gene:17594384 | gene:17592922 | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Lmo0271 protein; Highly similar to phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | 0.491 |
lmo1703 | lmo0581 | gene:17594384 | gene:17593232 | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Lmo0581 protein. | 0.543 |
lmo1703 | lmo0811 | gene:17594384 | gene:17593462 | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Lmo0811 protein; Similar to carbonic anhydrase. | 0.582 |
lmo1703 | lmo1701 | gene:17594384 | gene:17594382 | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Lmo1701 protein. | 0.709 |
lmo1703 | lmo1702 | gene:17594384 | gene:17594383 | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Fosfomycin resistance protein FosX; Catalyzes the hydration of fosfomycin. Belongs to the fosfomycin resistance protein family. | 0.898 |
lmo1703 | lmo1704 | gene:17594384 | gene:17594385 | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Lmo1704 protein; Similar to conserved hypothetical proteins. | 0.592 |
lmo1703 | lmo1750 | gene:17594384 | gene:17594432 | Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Lmo1750 protein. | 0.491 |
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