STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo1703Similar to similar to RNA methyltransferases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (459 aa)    
Predicted Functional Partners:
lmo1702
Fosfomycin resistance protein FosX; Catalyzes the hydration of fosfomycin. Belongs to the fosfomycin resistance protein family.
  
  
 0.898
lmo1701
Lmo1701 protein.
  
    0.709
lmo1704
Lmo1704 protein; Similar to conserved hypothetical proteins.
  
    0.592
lmo0811
Lmo0811 protein; Similar to carbonic anhydrase.
   
  
 0.582
lmo0581
Lmo0581 protein.
  
  
 0.543
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
    0.530
lmo1938
Lmo1938 protein; Similar to similar to ribosomal protein S1 like protein.
  
    0.498
lmo0167
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
 
  
 0.497
lmo0271
Lmo0271 protein; Highly similar to phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
  
 0.491
lmo1750
Lmo1750 protein.
      
 0.491
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
Server load: low (38%) [HD]