STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmo2196Lmo2196 protein; Similar to pheromone ABC transporter (binding protein). (558 aa)    
Predicted Functional Partners:
lmo2194
Lmo2194 protein; Similar to oligopeptide ABC transporter (permease).
 
 0.997
lmo2193
Lmo2193 protein; Similar to oligopeptide ABC transporter (ATP-binding protein).
 
 0.995
lmo2195
Lmo2195 protein; Similar to oligopeptide ABC transporter (permease).
 
 0.995
lmo2192
Lmo2192 protein; Similar to oligopeptide ABC transporter (ATP-binding protein).
 
 0.994
lmo0269
Lmo0269 protein; Similar to transporter.
 
 
 0.962
lmo0152
Lmo0152 protein; Similar to oligopeptide ABC transporter-binding protein.
  
 
 
0.871
lmo0137
Lmo0137 protein; Similar to oligopeptide ABC transporter, permease protein.
 
 0.853
lmo0136
Lmo0136 protein; Similar to oligopeptide ABC transporter, permease protein.
 
 0.818
lmo2569
Lmo2569 protein; Similar to dipeptide ABC transporter (dipeptide-binding protein).
  
  
 
0.814
lmo0135
Lmo0135 protein; Similar to oligopeptide ABC transport system substrate-binding proteins.
 
 
0.733
Your Current Organism:
Listeria monocytogenes
NCBI taxonomy Id: 169963
Other names: L. monocytogenes EGD-e, Listeria monocytogenes ATCC BAA-679, Listeria monocytogenes EGD-e, Listeria monocytogenes EGDe, Listeria monocytogenes str. EGD-e, Listeria monocytogenes strain EGD-e
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.