Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
lmo0169 | lmo0554 | gene:17592805 | gene:17593205 | Putative sugar uptake protein lmo0169; Similar to a glucose uptake protein. | Lmo0554 protein; Similar to NADH-dependent butanol dehydrogenase. | 0.665 |
lmo0169 | lmo0669 | gene:17592805 | gene:17593320 | Putative sugar uptake protein lmo0169; Similar to a glucose uptake protein. | Lmo0669 protein; Similar to oxidoreductase. | 0.808 |
lmo0169 | lmo0794 | gene:17592805 | gene:17593445 | Putative sugar uptake protein lmo0169; Similar to a glucose uptake protein. | Lmo0794 protein; Similar to B. subtilis YwnB protein. | 0.856 |
lmo0169 | lmo0913 | gene:17592805 | gene:17593568 | Putative sugar uptake protein lmo0169; Similar to a glucose uptake protein. | Similar to succinate semialdehyde dehydrogenase. | 0.805 |
lmo0169 | lmo2391 | gene:17592805 | gene:17595101 | Putative sugar uptake protein lmo0169; Similar to a glucose uptake protein. | Conserved hypothetical protein similar to B. subtilis YhfK protein. | 0.786 |
lmo0169 | lmo2571 | gene:17592805 | gene:17595282 | Putative sugar uptake protein lmo0169; Similar to a glucose uptake protein. | Lmo2571 protein; Similar to nicotinamidase. | 0.790 |
lmo0169 | lmo2572 | gene:17592805 | gene:17595283 | Putative sugar uptake protein lmo0169; Similar to a glucose uptake protein. | Lmo2572 protein; Similar to Chain A, Dihydrofolate Reductase. | 0.824 |
lmo0169 | lmo2573 | gene:17592805 | gene:17595284 | Putative sugar uptake protein lmo0169; Similar to a glucose uptake protein. | Zinc-type alcohol dehydrogenase-like protein; Similar to zinc-binding dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | 0.835 |
lmo0554 | lmo0169 | gene:17593205 | gene:17592805 | Lmo0554 protein; Similar to NADH-dependent butanol dehydrogenase. | Putative sugar uptake protein lmo0169; Similar to a glucose uptake protein. | 0.665 |
lmo0554 | lmo0669 | gene:17593205 | gene:17593320 | Lmo0554 protein; Similar to NADH-dependent butanol dehydrogenase. | Lmo0669 protein; Similar to oxidoreductase. | 0.819 |
lmo0554 | lmo0794 | gene:17593205 | gene:17593445 | Lmo0554 protein; Similar to NADH-dependent butanol dehydrogenase. | Lmo0794 protein; Similar to B. subtilis YwnB protein. | 0.875 |
lmo0554 | lmo0913 | gene:17593205 | gene:17593568 | Lmo0554 protein; Similar to NADH-dependent butanol dehydrogenase. | Similar to succinate semialdehyde dehydrogenase. | 0.713 |
lmo0554 | lmo2391 | gene:17593205 | gene:17595101 | Lmo0554 protein; Similar to NADH-dependent butanol dehydrogenase. | Conserved hypothetical protein similar to B. subtilis YhfK protein. | 0.843 |
lmo0554 | lmo2571 | gene:17593205 | gene:17595282 | Lmo0554 protein; Similar to NADH-dependent butanol dehydrogenase. | Lmo2571 protein; Similar to nicotinamidase. | 0.816 |
lmo0554 | lmo2572 | gene:17593205 | gene:17595283 | Lmo0554 protein; Similar to NADH-dependent butanol dehydrogenase. | Lmo2572 protein; Similar to Chain A, Dihydrofolate Reductase. | 0.823 |
lmo0554 | lmo2573 | gene:17593205 | gene:17595284 | Lmo0554 protein; Similar to NADH-dependent butanol dehydrogenase. | Zinc-type alcohol dehydrogenase-like protein; Similar to zinc-binding dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | 0.836 |
lmo0554 | nifJ | gene:17593205 | gene:17593480 | Lmo0554 protein; Similar to NADH-dependent butanol dehydrogenase. | NifJ protein; Highly similar to pyruvate-flavodoxin oxidoreductase. | 0.590 |
lmo0669 | lmo0169 | gene:17593320 | gene:17592805 | Lmo0669 protein; Similar to oxidoreductase. | Putative sugar uptake protein lmo0169; Similar to a glucose uptake protein. | 0.808 |
lmo0669 | lmo0554 | gene:17593320 | gene:17593205 | Lmo0669 protein; Similar to oxidoreductase. | Lmo0554 protein; Similar to NADH-dependent butanol dehydrogenase. | 0.819 |
lmo0669 | lmo0794 | gene:17593320 | gene:17593445 | Lmo0669 protein; Similar to oxidoreductase. | Lmo0794 protein; Similar to B. subtilis YwnB protein. | 0.837 |
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