STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP51794.1Putative phosphatase YieH. (225 aa)    
Predicted Functional Partners:
AOP51793.1
Putative integral membrane protein.
       0.589
AOP54072.1
Membrane protein mosC.
 
    0.492
AOP54648.1
Multiple polyol-specific dehydrogenase; Belongs to the mannitol dehydrogenase family.
 
   
 0.485
AOP53895.1
16S rRNA (cytosine(967)-C(5))-methyltransferase.
     
 0.463
AOP54653.1
Xylulose kinase.
 
   
 0.454
AOP51795.1
Hypothetical protein.
       0.452
arc
Bacterial proteasome-activating AAA-ATPase (PAN).
  
   0.450
AOP55091.1
Permease of the major facilitator superfamily.
  
  
 0.445
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
    0.441
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.432
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.