STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52066.1Transcriptional regulator, IclR family. (249 aa)    
Predicted Functional Partners:
AOP52063.1
Histidine ammonia-lyase.
       0.821
AOP52065.1
Formiminoglutamic iminohydrolase.
 
     0.814
AOP52064.1
Hypothetical protein; Believed to be an alternative form of N-formylglutamate deformylase, but experimentally invalidated.
       0.785
AOP54883.1
Transcriptional regulator, IclR family.
  
     0.774
hutI
Imidazolonepropionase.
 
     0.655
AOP54506.1
Allophanate hydrolase 2 subunit 2.
  
    0.605
AOP54325.1
Transcriptional regulator, IclR family.
  
     0.552
AOP52061.1
Fatty-acid-CoA ligase FadD7.
   
   0.455
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.