STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53612.1Diadenosine tetraphosphate (Ap4A) hydrolase-like HIT family hydrolase; COG0537. (134 aa)    
Predicted Functional Partners:
AOP53611.1
Alkyl hydroperoxide reductase subunit C-like protein.
  
    0.630
AOP54339.1
Histidine triad (HIT) nucleotide-binding protein; Similarity with At5g48545 and YDL125C (HNT1).
  
     0.530
leuS
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.528
AOP53610.1
Hypothetical protein; FIG00447856.
       0.514
purC
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
   
   0.513
AOP53888.1
Acetyl-coenzyme A carboxyl transferase beta chain.
   
   0.513
AOP55166.1
Zinc uptake regulation protein ZUR.
   
   0.507
AOP55386.1
Adenylosuccinate lyase.
   
   0.507
AOP54664.1
TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA.
 
    0.477
AOP52646.1
Putative nudix hydrolase YeaB.
 
 
   0.424
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.