STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54715.1Siderophore biosynthesis protein, monooxygenase. (511 aa)    
Predicted Functional Partners:
AOP54714.1
Alcaligin biosynthesis complex, large chain Siderophore synthetase component, ligase; Siderophore synthetase small component, acetyltransferase.
  
 0.980
AOP54077.1
Non-ribosomal peptide synthetase, terminal component.
  
 
 0.666
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.662
AOP53544.1
Aromatic-L-amino-acid decarboxylase.
 
  
 0.657
AOP53998.1
Penicillin amidase precursor.
  
  
 0.567
AOP55472.1
Siderophore-interacting protein.
 
  
 0.565
AOP51971.1
Putative iron-regulated membrane protein; Iron-uptake factor PiuB.
 
    0.564
AOP52820.1
Putative iron-regulated membrane protein; Iron-uptake factor PiuB.
 
    0.556
AOP54546.1
Protein export cytoplasm protein SecA ATPase RNA helicase; TCDB 3.A.5.1.1.
  
  
 0.555
AOP52154.1
Diaminobutyrate-pyruvate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.512
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.