STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP54741.1N-Acetylneuraminate cytidylyltransferase. (456 aa)    
Predicted Functional Partners:
AOP54742.1
N-acetylneuraminate synthase.
  
 0.997
AOP54747.1
Hypothetical protein.
   
 0.893
AOP54744.1
Glycosyl transferase.
 
  
 0.865
AOP54788.1
Putative glycosyl transferase.
 
  
 0.684
AOP52318.1
Succinoglycan biosynthesis protein ExoA.
 
    0.650
AOP52201.1
O-antigen export system, permease protein.
 
   
 0.615
AOP54789.1
Glycosyltransferase.
 
  
 0.591
AOP54568.1
Poly(glycerol-phosphate) alpha-glucosyltransferase.
 
  
 0.569
AOP54790.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
  
 0.567
AOP55238.1
Integral membrane protein.
 
  
 0.566
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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