STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55311.13-oxoacyl-[ACP] synthase III in alkane synthesis cluster. (342 aa)    
Predicted Functional Partners:
AOP55312.1
Haloalkane dehalogenase-like protein; AMP-dependent synthetase/ligase in alkane synthesis cluster.
   
 0.985
AOP55313.1
NAD(P)H steroid dehydrogenase-like protein in alkane synthesis cluster.
 
     0.948
AOP53607.1
Malonyl CoA-acyl carrier protein transacylase.
 
  
 0.804
AOP53604.1
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
  
 0.779
AOP51817.1
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.759
AOP55291.1
NAD(P)H steroid dehydrogenase-like protein in alkane synthesis cluster.
 
     0.738
AOP53888.1
Acetyl-coenzyme A carboxyl transferase beta chain.
  
  
 0.706
AOP53832.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
  
  
 0.673
AOP55199.1
3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II.
  
   0.627
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
  
 0.624
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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