STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55440.1ABC transporter, ATP-binding protein. (295 aa)    
Predicted Functional Partners:
AOP55441.1
Membrane protein, putative.
  
 0.976
AOP55344.1
L-proline glycine betaine ABC transport system permease protein ProV; TCDB 3.A.1.12.1.
    
0.894
AOP55268.1
Putative ABC transporter permease.
 
  
 0.887
AOP54711.1
ATP binding protein.
     
0.774
AOP55442.1
Acetyltransferase, putative.
       0.615
AOP55433.1
Putative two-component system sensor kinase.
 
     0.553
AOP53888.1
Acetyl-coenzyme A carboxyl transferase beta chain.
      0.552
AOP54654.1
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; TCDB 3.A.1.1.3; Belongs to the ABC transporter superfamily.
     
0.526
AOP54086.1
Branched-chain amino acid transport system permease protein LivM; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
      0.522
AOP55436.1
Sortase A, LPXTG specific.
 
     0.473
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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