STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPK47257.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1031 aa)    
Predicted Functional Partners:
KPK47258.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.994
KPK46011.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.868
KPK47978.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
    
  0.846
KPK47336.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.822
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
 
  0.822
KPK45997.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.821
KPK47299.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.817
rnc
Hypothetical protein; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
   0.786
KPK48139.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.632
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
   0.628
Your Current Organism:
Dehalococcoidia bacterium SM23282
NCBI taxonomy Id: 1703396
Other names: D. bacterium SM23_28_2, Dehalococcoidia bacterium SM23_28_2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.