STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKJ43563.1Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)    
Predicted Functional Partners:
OKJ45166.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.986
OKJ32480.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.960
OKJ44948.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.954
OKJ27981.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.923
OKJ32500.1
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.917
OKJ32501.1
Methylaspartate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.917
OKJ45181.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.915
OKJ37222.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.903
OKJ43565.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.897
OKJ32493.1
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.892
Your Current Organism:
Streptomyces sp. CB01580
NCBI taxonomy Id: 1703933
Other names: S. sp. CB01580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.