STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI88992.1Site-specific recombinase XerD. (428 aa)    
Predicted Functional Partners:
SEI57882.1
ATP synthase protein I.
  
     0.636
SEI40433.1
Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
  
     0.613
SEI89049.1
3-hydroxybutyryl-CoA dehydrogenase.
    
  0.541
SEI40419.1
Succinate dehydrogenase subunit C.
  
     0.532
SEI38547.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.497
SEI46591.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.497
SEI89146.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
  0.497
SEI89018.1
glutaryl-CoA dehydrogenase.
    
  0.488
SEJ54459.1
Hypothetical protein.
  
     0.461
SEI60164.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
  
  
 0.455
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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