STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC88AGirdin isoform X1. (2055 aa)    
Predicted Functional Partners:
GLG1
Golgi apparatus protein 1.
   
    0.868
PRR15
Proline-rich protein 15.
      
 0.685
GNAI3
Guanine nucleotide-binding protein G(K) subunit alpha.
    
 
 0.632
GNAI2
Guanine nucleotide-binding protein G(I) subunit alpha-2.
    
 
 0.625
GNAI1
Guanine nucleotide-binding protein G(I) subunit alpha-1.
    
 
 0.620
RND1
Rho-related GTP-binding protein Rho6.
    
  0.613
RND3
Rho-related GTP-binding protein RhoE isoform X1.
    
  0.613
BTBD7
BTB/POZ domain-containing protein 7 isoform X1.
      
 0.610
NDEL1
Nuclear distribution protein nudE-like 1 isoform X1.
    
 
 0.589
TACC1
Transforming acidic coiled-coil-containing protein 1 isoform X1.
    
 
 0.575
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.