Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTS-EII-19 | fcsK | spr1967 | spr1973 | Phosphotransferase system sugar-specific EII component. | Fucose kinase. | 0.499 |
PTS-EII-19 | fucA | spr1967 | spr1972 | Phosphotransferase system sugar-specific EII component. | L-fuculose phosphate aldolase. | 0.724 |
PTS-EII-19 | fucI | spr1967 | spr1964 | Phosphotransferase system sugar-specific EII component. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.483 |
PTS-EII-19 | fucU | spr1967 | spr1971 | Phosphotransferase system sugar-specific EII component. | Fucose pathway protein, function unknown; Belongs to the RbsD / FucU family. | 0.781 |
PTS-EII-19 | scrK | spr1967 | spr1565 | Phosphotransferase system sugar-specific EII component. | Fructokinase. | 0.806 |
PTS-EII-19 | spr1965 | spr1967 | spr1965 | Phosphotransferase system sugar-specific EII component. | Hypothetical protein. | 0.605 |
PTS-EII-19 | spr1966 | spr1967 | spr1966 | Phosphotransferase system sugar-specific EII component. | Conserved hypothetical protein. | 0.748 |
adh2 | fucI | spr1963 | spr1964 | Probable alcohol dehydrogenase. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.545 |
fcsK | PTS-EII-19 | spr1973 | spr1967 | Fucose kinase. | Phosphotransferase system sugar-specific EII component. | 0.499 |
fcsK | fucA | spr1973 | spr1972 | Fucose kinase. | L-fuculose phosphate aldolase. | 0.989 |
fcsK | fucI | spr1973 | spr1964 | Fucose kinase. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.997 |
fcsK | fucU | spr1973 | spr1971 | Fucose kinase. | Fucose pathway protein, function unknown; Belongs to the RbsD / FucU family. | 0.881 |
fcsK | spr1965 | spr1973 | spr1965 | Fucose kinase. | Hypothetical protein. | 0.571 |
fcsK | spr1966 | spr1973 | spr1966 | Fucose kinase. | Conserved hypothetical protein. | 0.619 |
fucA | PTS-EII-19 | spr1972 | spr1967 | L-fuculose phosphate aldolase. | Phosphotransferase system sugar-specific EII component. | 0.724 |
fucA | fcsK | spr1972 | spr1973 | L-fuculose phosphate aldolase. | Fucose kinase. | 0.989 |
fucA | fucI | spr1972 | spr1964 | L-fuculose phosphate aldolase. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.780 |
fucA | fucU | spr1972 | spr1971 | L-fuculose phosphate aldolase. | Fucose pathway protein, function unknown; Belongs to the RbsD / FucU family. | 0.959 |
fucA | spr1950 | spr1972 | spr1950 | L-fuculose phosphate aldolase. | Conserved hypothetical protein; Putative sugar operon regulatory protein. | 0.486 |
fucA | spr1965 | spr1972 | spr1965 | L-fuculose phosphate aldolase. | Hypothetical protein. | 0.723 |
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