STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucIL-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (588 aa)    
Predicted Functional Partners:
fcsK
Fucose kinase.
 
 
 0.997
scrK
Fructokinase.
  
 
 0.813
fucA
L-fuculose phosphate aldolase.
  
  
 0.780
fucU
Fucose pathway protein, function unknown; Belongs to the RbsD / FucU family.
 
   
 0.759
spr1966
Conserved hypothetical protein.
 
    0.717
spr1965
Hypothetical protein.
  
    0.640
spr1950
Conserved hypothetical protein; Putative sugar operon regulatory protein.
     
 0.636
xylR
Xylose repressor protein.
     
 0.614
adh2
Probable alcohol dehydrogenase.
  
  
 0.545
PTS-EII-19
Phosphotransferase system sugar-specific EII component.
  
    0.483
Your Current Organism:
Streptococcus pneumoniae
NCBI taxonomy Id: 171101
Other names: S. pneumoniae R6, Streptococcus pneumoniae (strain ATCC BAA-255 / R6), Streptococcus pneumoniae R6, Streptococcus pneumoniae str. R6
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