Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SJZ40430.1 | SJZ45604.1 | SAMN02745154_00009 | SAMN02745154_00170 | DNA polymerase-1. | Serine/threonine protein kinase. | 0.427 |
| SJZ40430.1 | SJZ47181.1 | SAMN02745154_00009 | SAMN02745154_00230 | DNA polymerase-1. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.721 |
| SJZ40430.1 | SJZ49779.1 | SAMN02745154_00009 | SAMN02745154_00329 | DNA polymerase-1. | Chromosome segregation ATPase. | 0.570 |
| SJZ40430.1 | SJZ49810.1 | SAMN02745154_00009 | SAMN02745154_00330 | DNA polymerase-1. | Chromosome segregation ATPase. | 0.570 |
| SJZ40430.1 | ftsZ | SAMN02745154_00009 | SAMN02745154_00689 | DNA polymerase-1. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.804 |
| SJZ40430.1 | secA | SAMN02745154_00009 | SAMN02745154_00579 | DNA polymerase-1. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.822 |
| SJZ40430.1 | topA | SAMN02745154_00009 | SAMN02745154_00391 | DNA polymerase-1. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.994 |
| SJZ45604.1 | SJZ40430.1 | SAMN02745154_00170 | SAMN02745154_00009 | Serine/threonine protein kinase. | DNA polymerase-1. | 0.427 |
| SJZ45604.1 | SJZ49779.1 | SAMN02745154_00170 | SAMN02745154_00329 | Serine/threonine protein kinase. | Chromosome segregation ATPase. | 0.948 |
| SJZ45604.1 | SJZ49810.1 | SAMN02745154_00170 | SAMN02745154_00330 | Serine/threonine protein kinase. | Chromosome segregation ATPase. | 0.948 |
| SJZ45604.1 | ftsZ | SAMN02745154_00170 | SAMN02745154_00689 | Serine/threonine protein kinase. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.829 |
| SJZ45604.1 | mraZ | SAMN02745154_00170 | SAMN02745154_00686 | Serine/threonine protein kinase. | MraZ protein; Belongs to the MraZ family. | 0.438 |
| SJZ45604.1 | topA | SAMN02745154_00170 | SAMN02745154_00391 | Serine/threonine protein kinase. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.510 |
| SJZ47181.1 | SJZ40430.1 | SAMN02745154_00230 | SAMN02745154_00009 | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | DNA polymerase-1. | 0.721 |
| SJZ47181.1 | ftsZ | SAMN02745154_00230 | SAMN02745154_00689 | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.762 |
| SJZ47181.1 | secA | SAMN02745154_00230 | SAMN02745154_00579 | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.999 |
| SJZ47181.1 | topA | SAMN02745154_00230 | SAMN02745154_00391 | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.878 |
| SJZ49779.1 | SJZ40430.1 | SAMN02745154_00329 | SAMN02745154_00009 | Chromosome segregation ATPase. | DNA polymerase-1. | 0.570 |
| SJZ49779.1 | SJZ45604.1 | SAMN02745154_00329 | SAMN02745154_00170 | Chromosome segregation ATPase. | Serine/threonine protein kinase. | 0.948 |
| SJZ49779.1 | SJZ49810.1 | SAMN02745154_00329 | SAMN02745154_00330 | Chromosome segregation ATPase. | Chromosome segregation ATPase. | 0.602 |
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