STRINGSTRING
JOFV01000001_gene1861 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000001_gene1861" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000001_gene1861annotation not available (397 aa)    
Predicted Functional Partners:
JOFV01000007_gene2963
annotation not available (402 aa)
 
   
  0.987
JOFV01000005_gene2440
annotation not available (117 aa)
   
  0.858
JOFV01000016_gene46
annotation not available (1198 aa)
   
 
  0.830
JOFV01000015_gene1780
annotation not available (720 aa)
   
 
  0.784
JOFV01000016_gene61
annotation not available (450 aa)
     
 
  0.766
JOFV01000012_gene724
annotation not available (349 aa)
 
 
  0.751
JOFV01000017_gene88
annotation not available (966 aa)
       
  0.749
JOFV01000007_gene2965
annotation not available (401 aa)
 
 
  0.747
JOFV01000007_gene2964
annotation not available (190 aa)
   
 
  0.728
JOFV01000012_gene723
annotation not available (362 aa)
   
   
  0.702
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
Server load: low (12%) [HD]