STRINGSTRING
JOFV01000001_gene1875 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000001_gene1875" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000001_gene1875annotation not available (314 aa)    
Predicted Functional Partners:
JOFV01000001_gene1876
annotation not available (770 aa)
              0.846
JOFV01000001_gene1877
annotation not available (54 aa)
 
          0.787
JOFV01000001_gene1878
annotation not available (162 aa)
              0.693
JOFV01000024_gene2112
annotation not available (197 aa)
   
          0.610
JOFV01000007_gene2920
annotation not available (196 aa)
 
          0.580
JOFV01000011_gene2501
annotation not available (229 aa)
   
          0.562
JOFV01000008_gene3033
annotation not available (54 aa)
 
          0.532
JOFV01000017_gene128
annotation not available (195 aa)
   
          0.512
JOFV01000008_gene3226
annotation not available (291 aa)
 
          0.490
JOFV01000002_gene627
annotation not available (244 aa)
   
          0.458
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
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