STRINGSTRING
JOFV01000001_gene1935 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000001_gene1935" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000001_gene1935annotation not available (369 aa)    
Predicted Functional Partners:
JOFV01000001_gene1936
annotation not available (375 aa)
   
        0.776
JOFV01000001_gene1937
annotation not available (184 aa)
              0.771
JOFV01000001_gene1934
annotation not available (468 aa)
   
        0.696
JOFV01000004_gene3440
annotation not available (318 aa)
   
        0.609
JOFV01000001_gene1941
annotation not available (871 aa)
   
        0.589
JOFV01000001_gene1939
annotation not available (203 aa)
   
        0.566
JOFV01000001_gene1938
annotation not available (684 aa)
              0.556
JOFV01000001_gene1940
annotation not available (344 aa)
              0.553
JOFV01000001_gene1933
annotation not available (167 aa)
              0.515
JOFV01000001_gene1946
annotation not available (343 aa)
              0.489
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
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