STRINGSTRING
JOFV01000001_gene1939 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000001_gene1939" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000001_gene1939annotation not available (203 aa)    
Predicted Functional Partners:
JOFV01000001_gene1941
annotation not available (871 aa)
 
  0.990
JOFV01000001_gene1940
annotation not available (344 aa)
 
 
  0.985
JOFV01000007_gene2935
annotation not available (395 aa)
       
  0.929
JOFV01000007_gene2933
annotation not available (462 aa)
 
 
  0.927
JOFV01000001_gene1938
annotation not available (684 aa)
   
   
  0.893
JOFV01000001_gene1942
annotation not available (169 aa)
   
        0.849
JOFV01000008_gene3040
annotation not available (330 aa)
 
 
  0.827
JOFV01000004_gene3479
annotation not available (482 aa)
 
 
  0.819
JOFV01000003_gene1657
annotation not available (721 aa)
       
    0.814
JOFV01000004_gene3472
annotation not available (146 aa)
   
    0.794
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
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