STRINGSTRING
JOFV01000001_gene1985 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000001_gene1985" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000001_gene1985annotation not available (280 aa)    
Predicted Functional Partners:
JOFV01000010_gene1240
annotation not available (78 aa)
   
 
 
  0.685
JOFV01000001_gene1867
annotation not available (675 aa)
   
  0.681
JOFV01000001_gene1941
annotation not available (871 aa)
       
    0.659
JOFV01000002_gene463
annotation not available (339 aa)
   
          0.656
JOFV01000015_gene1774
annotation not available (80 aa)
   
 
 
  0.604
JOFV01000001_gene1983
annotation not available (748 aa)
              0.601
JOFV01000002_gene464
annotation not available (401 aa)
   
          0.594
JOFV01000006_gene2776
annotation not available (219 aa)
       
  0.581
JOFV01000010_gene1201
annotation not available (407 aa)
   
 
  0.562
JOFV01000004_gene3377
annotation not available (133 aa)
   
   
  0.555
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
Server load: low (10%) [HD]