STRINGSTRING
JOFV01000001_gene1994 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000001_gene1994" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000001_gene1994annotation not available (219 aa)    
Predicted Functional Partners:
JOFV01000001_gene1997
annotation not available (573 aa)
  0.999
JOFV01000001_gene1995
annotation not available (263 aa)
 
  0.999
JOFV01000011_gene2482
annotation not available (467 aa)
  0.994
JOFV01000001_gene1996
annotation not available (418 aa)
 
  0.989
JOFV01000001_gene2002
annotation not available (1146 aa)
 
 
  0.966
JOFV01000001_gene2004
annotation not available (1440 aa)
 
 
  0.961
JOFV01000001_gene2000
annotation not available (81 aa)
 
   
  0.959
JOFV01000001_gene2003
annotation not available (3008 aa)
 
 
  0.956
JOFV01000001_gene2005
annotation not available (81 aa)
 
   
  0.926
JOFV01000001_gene1998
annotation not available (513 aa)
 
   
  0.875
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
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