STRINGSTRING
JOFV01000001_gene2078 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000001_gene2078" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000001_gene2078annotation not available (1356 aa)    
Predicted Functional Partners:
JOFV01000005_gene2214
annotation not available (307 aa)
   
        0.769
JOFV01000002_gene569
annotation not available (556 aa)
 
          0.739
JOFV01000004_gene3444
annotation not available (180 aa)
   
          0.738
JOFV01000002_gene464
annotation not available (401 aa)
   
          0.718
JOFV01000015_gene1749
annotation not available (876 aa)
   
  0.710
JOFV01000001_gene1883
annotation not available (244 aa)
   
          0.710
JOFV01000002_gene463
annotation not available (339 aa)
   
          0.706
JOFV01000001_gene1834
annotation not available (212 aa)
   
          0.691
JOFV01000013_gene1027
annotation not available (117 aa)
   
          0.653
JOFV01000017_gene123
annotation not available (323 aa)
   
          0.634
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
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