STRINGSTRING
JOFV01000001_gene2090 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000001_gene2090" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000001_gene2090annotation not available (362 aa)    
Predicted Functional Partners:
JOFV01000002_gene438
annotation not available (909 aa)
         
  0.743
JOFV01000020_gene1402
annotation not available (3100 aa)
   
 
  0.731
JOFV01000020_gene1401
annotation not available (741 aa)
   
 
    0.515
JOFV01000003_gene1566
annotation not available (480 aa)
     
 
  0.499
JOFV01000001_gene2091
annotation not available (522 aa)
              0.470
JOFV01000006_gene2578
annotation not available (584 aa)
 
 
  0.461
JOFV01000001_gene1991
annotation not available (496 aa)
 
 
  0.460
JOFV01000016_gene66
annotation not available (603 aa)
         
  0.457
JOFV01000005_gene2439
annotation not available (606 aa)
         
  0.457
JOFV01000005_gene2417
annotation not available (510 aa)
         
  0.456
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
Server load: low (9%) [HD]