STRINGSTRING
JOFV01000002_gene414 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000002_gene414" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000002_gene414annotation not available (527 aa)    
Predicted Functional Partners:
JOFV01000002_gene415
annotation not available (261 aa)
 
  0.999
JOFV01000001_gene2064
annotation not available (344 aa)
   
 
  0.999
JOFV01000008_gene3088
annotation not available (608 aa)
 
    0.994
JOFV01000003_gene1591
annotation not available (710 aa)
 
 
    0.993
JOFV01000012_gene823
annotation not available (505 aa)
     
  0.931
JOFV01000019_gene1084
annotation not available (288 aa)
   
 
    0.831
JOFV01000006_gene2710
annotation not available (245 aa)
   
 
    0.831
JOFV01000005_gene2277
annotation not available (260 aa)
   
 
    0.831
JOFV01000004_gene3298
annotation not available (315 aa)
       
    0.772
JOFV01000008_gene3288
annotation not available (298 aa)
   
 
  0.770
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
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