STRINGSTRING
JOFV01000002_gene464 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000002_gene464" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000002_gene464annotation not available (401 aa)    
Predicted Functional Partners:
JOFV01000002_gene463
annotation not available (339 aa)
          0.979
JOFV01000004_gene3444
annotation not available (180 aa)
   
          0.757
JOFV01000002_gene462
annotation not available (315 aa)
 
          0.741
JOFV01000002_gene569
annotation not available (556 aa)
   
          0.726
JOFV01000006_gene2691
annotation not available (363 aa)
   
          0.721
JOFV01000001_gene2078
annotation not available (1356 aa)
   
          0.718
JOFV01000002_gene465
annotation not available (475 aa)
 
          0.707
JOFV01000010_gene1133
annotation not available (497 aa)
   
          0.705
JOFV01000003_gene1543
annotation not available (501 aa)
   
          0.690
JOFV01000005_gene2409
annotation not available (318 aa)
   
          0.666
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
Server load: low (9%) [HD]