STRINGSTRING
JOFV01000002_gene467 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000002_gene467" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000002_gene467annotation not available (264 aa)    
Predicted Functional Partners:
JOFV01000002_gene468
annotation not available (305 aa)
              0.859
JOFV01000005_gene2215
annotation not available (321 aa)
 
            0.733
JOFV01000010_gene1149
annotation not available (734 aa)
       
    0.726
JOFV01000002_gene469
annotation not available (99 aa)
              0.659
JOFV01000024_gene2108
annotation not available (696 aa)
   
  0.632
JOFV01000002_gene438
annotation not available (909 aa)
   
 
  0.626
JOFV01000002_gene620
annotation not available (1194 aa)
   
 
    0.612
JOFV01000002_gene517
annotation not available (1269 aa)
   
 
    0.605
JOFV01000006_gene2736
annotation not available (330 aa)
       
    0.525
JOFV01000008_gene3270
annotation not available (82 aa)
     
 
  0.509
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
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