STRINGSTRING
JOFV01000002_gene479 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000002_gene479" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000002_gene479annotation not available (295 aa)    
Predicted Functional Partners:
JOFV01000002_gene478
annotation not available (301 aa)
    0.984
JOFV01000002_gene480
annotation not available (385 aa)
 
    0.937
JOFV01000022_gene1710
annotation not available (298 aa)
 
    0.927
JOFV01000014_gene898
annotation not available (320 aa)
 
    0.913
JOFV01000001_gene1969
annotation not available (280 aa)
    0.899
JOFV01000003_gene1506
annotation not available (298 aa)
 
    0.897
JOFV01000019_gene1101
annotation not available (272 aa)
 
    0.888
JOFV01000006_gene2565
annotation not available (297 aa)
 
    0.872
JOFV01000008_gene3125
annotation not available (309 aa)
 
    0.857
JOFV01000003_gene1606
annotation not available (317 aa)
 
    0.839
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
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