STRINGSTRING
JOFV01000002_gene536 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000002_gene536" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000002_gene536annotation not available (375 aa)    
Predicted Functional Partners:
JOFV01000002_gene535
annotation not available (176 aa)
 
          0.925
JOFV01000002_gene537
annotation not available (176 aa)
 
          0.898
JOFV01000002_gene532
annotation not available (469 aa)
 
          0.793
JOFV01000008_gene3104
annotation not available (286 aa)
 
          0.783
JOFV01000002_gene533
annotation not available (229 aa)
 
          0.773
JOFV01000010_gene1137
annotation not available (514 aa)
       
    0.763
JOFV01000008_gene3108
annotation not available (185 aa)
   
          0.756
JOFV01000008_gene3105
annotation not available (315 aa)
 
          0.752
JOFV01000020_gene1386
annotation not available (477 aa)
 
          0.750
JOFV01000008_gene3107
annotation not available (115 aa)
   
          0.747
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
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