STRINGSTRING
JOFV01000002_gene544 protein (Oerskovia turbata) - STRING interaction network
"JOFV01000002_gene544" - annotation not available in Oerskovia turbata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JOFV01000002_gene544annotation not available (440 aa)    
Predicted Functional Partners:
JOFV01000002_gene545
annotation not available (251 aa)
 
          0.973
JOFV01000002_gene546
annotation not available (419 aa)
 
          0.973
JOFV01000002_gene548
annotation not available (430 aa)
 
          0.950
JOFV01000002_gene547
annotation not available (396 aa)
 
          0.901
JOFV01000010_gene1228
annotation not available (1140 aa)
     
  0.834
JOFV01000010_gene1227
annotation not available (1289 aa)
     
  0.802
JOFV01000010_gene1194
annotation not available (339 aa)
       
  0.774
JOFV01000007_gene2943
annotation not available (90 aa)
     
  0.769
JOFV01000015_gene1749
annotation not available (876 aa)
     
 
    0.750
JOFV01000002_gene550
annotation not available (329 aa)
   
          0.742
Your Current Organism:
Oerskovia turbata
NCBI taxonomy Id: 1713
Other names: ATCC 25835, CFBP 4266, CIP 100331, Cellulomonas turbata, Cellulosimonas turbata, DSM 20577, IFO 15015, JCM 3160, LMG 4072, NBRC 15015, NCIB 10587, NCIMB 10587, NCTC 11973, NRRL B-8019, Nocardia turbata, O. turbata, Oerskovia turbata, strain 891, strain rskov 27
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